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Evidence-led articles on scientific methods, reproducible workflows, and software decisions.
How to Select Compounds After Molecular Docking: From Ranked Results to an Experimental Shortlist
A docking screen ends with a ranked list, but an assay needs a defensible shortlist. Learn how to combine rank, pose quality, chemical diversity, artifact risk, availability, and controls before experimental testing.
In Silico Drug Discovery Today: How Structure Prediction, Virtual Screening, AI, and Experiments Work Together
Modern in silico drug discovery is not one algorithm. Learn how target evidence, structure prediction, molecular docking, virtual screening, AI, physics-based refinement, and experiments work as one traceable decision system.
AutoDock Vina Batch Docking: How to Screen a Ligand Library Without Losing Traceability
Screen multiple ligands without losing the scientific record. Preserve stable identities, one frozen Vina protocol, failures, ranked poses, exports, and local job history across the batch.
How to Validate a Molecular Docking Workflow Before Screening a Ligand Library
Validate a molecular docking workflow before committing a ligand library: separate pose recovery from screening discrimination, test early enrichment and robustness, and define a defensible go/no-go decision.
How to Choose Molecular Docking Software for Reproducible Small-Molecule Screening
A practical buyer guide for researchers evaluating molecular docking software: preparation, search-space control, engine settings, pose review, job history, export, licensing, and fit.
AlphaFold Didn’t Replace Molecular Docking—It Unlocked Its Next Era
AlphaFold has dramatically reduced the structural bottleneck that kept many protein targets outside docking studies. Learn how predicted structures become receptor starting points for protein–small-molecule docking and virtual screening with AutoDock Vina.